Molecular biologist with extensive research background and proven teaching ability. Valuable asset in educational and research environments. Strong focus on contributing effectively to students and diverse scientific projects. Brings wealth of knowledge and expertise. Experience in conducting thorough research and analyzing complex data sets. Approaches scientific challenges with precision and critical thinking. Dedicated to staying up-to-date with latest advancements in the field, providing innovative solutions and contributing to cutting-edge discoveries.
Overview
12
12
years of professional experience
Work History
Research Scientist
Wilfrid Laurier University
07.2024 - Current
Research Scientist, Mitochondrial involvement in decreasing the proliferation of cancer cells when exposed to electromagnetic field stimulation, Dr. Nirosha J. Murugan, Wilfrid Laurier University, Waterloo, ON.
Role of mitochondria and TRP channels when cancer cells are exposed to electromagnetic field stimulation .
Culture of cancerous cell lines
Treating them with electromagnetic fields
Testing the cell viability, cytotoxicity, gene and protein expression, immune response to the fields, mitochondrial activity, mitochondrial biogenesis, and data analysis , among others.
Postdoctoral Research Fellow
Center for Addiction and Mental Health
05.2019 - 08.2023
Therapeutic small molecules and short peptides targeting MECP2 mutations in ID, Rett syndrome, and ASD patients, with Dr. John B Vincent, Molecular Neuropsychiatry and Development (MiND) Laboratory, Campbell Family Mental Health Research Institute, Center for Addiction and Mental Health
Cloning mutation in the MECP2 gene into human induced pluripotent stem cells (hiPSC) and other human cell lines using lentiviral and bacterial vectors
Differentiating hiPSC into neural and osteogenic lineage; treating hiPSC and lymphoblast from patients with Rett syndrome using small molecules and small peptides
Performing molecular techniques: RNA extraction, cDNA synthesis, RT-qPCR for gene expression analysis, custom ELISA for MECP2, western blot for protein analysis, cycloheximide chase assay for degradation kinetics
Conducting imaging using Confocal microscopy, FRAP, and performing image processing and data analysis
Mentoring undergraduate students in their summer placement projects and graduate students in their research projects
Contributed to the publication of multiple high-impact research articles, showcasing the significance of the findings.
Leveraged interpersonal and communication skills to mentor PhD, graduate and undergraduate students.
Volunteer Research Attachment
National University of Singapore
12.2013 - 07.2014
Osteogenic differentiation of human bone marrow stem cells in chitosan-gelatin based hydrogel under Dr. Toh Wei Song, at Faculty of Dentistry, National University of Singapore
Worked effectively in fast-paced environments.
Optimization, preparation, and characterization of chitosan-gelatin-beta glycerophosphate hydrogel
Cultivation of human bone marrow stem cells (BMSC) in both 2D and 3D hydrogel environments
Induction of osteogenic differentiation of BMSC within hydrogel scaffolds
Evaluation of osteogenic differentiation using immunohistochemistry for osteogenic markers
Imaging analysis utilizing Confocal microscopy and Scanning electron microscopy for 2D and hydrogel scaffold assessment
Self-motivated, with a strong sense of personal responsibility.
Organized and detail-oriented with a strong work ethic.
Excellent communication skills, both verbal and written.
Research Assistant
Sultan Qaboos University
10.2012 - 03.2013
Effects of Ethnopharmacological products on Animal Models with Acute and Chronic Renal Failure, under Prof. Badreldin Ali, Sultan Qaboos University, Sultanate of Oman
Creation of acute and chronic kidney disease models in mice and rats
Treatment of kidney disease using Ethnopharmacological products
Small animal handling: Proficient in administering injections (i.p., i.m., i.c., i.v.), oral administration, perfusion fixation of rats and mice, blood and organ collection, and suturing techniques
Conducting behavioral studies including the Acetic acid test, hole board test, forced swimming test, activity cage test, and Rotorod assessment
TEM (Transmission Electron Microscopy): Experienced in sample preparation, embedding, and sectioning for ultrastructural analysis
Biochemical analysis: Proficiency in analyzing parameters such as urea, creatinine, total protein, drug-metabolizing enzymes, etc
Organized research materials, maintaining a well-ordered workspace conducive to productivity.
Streamlined project workflow, optimizing team efficiency through development of detailed scheduling and tracking systems.
ELISA (Enzyme-Linked Immunosorbent Assay): Skilled in performing ELISA assays for quantitative analysis of various biomolecules
Education
Ph.D. - Stem Cell Differentiation And Neuroscience
National University of Singapore
Singapore
12.2018
Masters - Bioscience (Human Genetics)
University of Leeds
Leeds, United Kingdom
12.2010
Bachelor of Technology (B.Tech) - Biotechnology
Anna University
Chennai, India
04.2009
Skills
Teaching experience
Microsoft Office
Adobe Photoshop
EndNote
GraphPad Prism
Histometrix
Essential FTIR
FlowJo
ImageJ
Imaris
Flowview
Schrodinger
QuantStudio
Communication
Collaboration
Adaptability
Problem-solving
Time management
Leadership
Emotional intelligence
Resilience
Critical thinking
Creativity
Scientific writing
Experimental work plans
Data analysis
Multitasking and organization
Technical troubleshooting
work expereince
Research Scientist at Wilfrid Laurier University, Waterloo 07/2024 -till date.
Postdoctoral research fellow at the Center for Addiction and Mental Health, Toronto, Canada 05/2019 to 08/2023.
Volunteer research attachment in the Faculty of Dentistry, National University of Singapore, Singapore 12/2013 to 07/2014.
Research Assistant at the Department of Pharmacology, College of Medicine, Sultan Qaboos University, Muscat, Oman O10/2012 to 30/2013.
Copy editor for TNQ Books and Journals from 10/2011 to 08/2012.
Teaching Experience
Current therapeutics in Cancer Care to HE440S: Cancer Biology course fourth-year health sciences students at Wilfrid Laurier University on Feb 10th, 2025.
Cancer Genetics to HE440S: Cancer Biology course fourth-year health sciences students at Wilfrid Laurier University on Feb 5th, 2025.
I presented my research titled Recent Research in Rett Syndrome Treatment to the HE100: Health Issues course first-year Health sciences students at Wilfrid Laurier University on Oct 9th,2024.
Mentored over 30 students since my Master's studies till date. I have mentored students to complete their projects in molecular biology, cell culture, imaging, data analysis and good laboratory practices.
Human Reproduction and Development: The Role of Molecular Genetics in Cell Differentiation and Morphogenesis, HN320: Human Physiology II, Wilfrid Laurier University, 03/10/25
Latest Advancements in Biomedical Engineering to improve Cancer Care to the HE100: Health Issues course first-year Health sciences students at Wilfrid Laurier University on 03/19/25
Cancer Immunology: The Role of Tumor Viruses in Carcinogenesis, to the HE100: Health Issues course first-year Health sciences students at Wilfrid Laurier University on 03/21/25
Accomplishments
NUS Research Scholarship with full tuition fee waiver and a monthly stipend for postgraduate studies.
Faculty of Biological Sciences International Scholarship award for my Masters.
Tamilnadu Government Scholarship award for studies during my Undergraduate.
Won best poster award on the topic Detection of Johne's disease using polymerase chain reaction at the national conference on The Techfest of Life Science on 03/28/09.
Won best poster award on the topic Gold Nanoshells for the Diagnosis and Treatment of Cancer at Medico Venturus'08 on 03/06/08.
Publications
Analysis of mRNA and protein expression levels of MECP2 in missense mutant hiPSC and lymphoblast lines against isogenic controls, Thulasi Thiruvallur Madanagopal, Stephen Pastore, Tahir Muhammad, Anna Mikhailov, John B. Vincent, manuscript under preparation
Short peptides targeting MECP2 Rett syndrome mutations through phage display, Thulasi Thiruvallur Madanagopal, Katherine Aw, Nadia Dorca, Stephen Pastore, Tahir Muhammad, Anna Mikhailov, John B. Vincent, manuscript under preparation
Small molecules from Atomwise targeting MECP2 Rett syndrome mutations in hiSPC and lymphoblasts from patients, Thulasi Thiruvallur Madanagopal, Stephen Pastore, Tahir Muhammad, Anna Mikhailov, John B. Vincent, manuscript under preparation
Molecular And in Silico Analysis Of CHD2 And CHD8 De Novo Mutations in Neurodevelopmental Disorders, Tahir Muhammad, Stephen Pastore, Anna Mikhailov, Thulasi Thiruvallur Madanagopal, Katrina Good, Juan Ausio, John B. Vincent, European Neuropsychopharmacology, 75, 1, S131-S132, 2023
Autism spectrum disorder trios from consanguineous populations are enriched for rare biallelic variants, identifying 32 new candidate genes, Ricardo Harripaul, Ricardo Harripaul, Ansa Rabia, Nasim Vasli, Anna Mikhailov, Ashlyn Rodrigues, Stephen F. Pastore, Tahir Muhammad, Thulasi Thiruvallur Madanagopal , Aisha Hashmi, Clinton Tran, Cassandra Stan, Katherine Aw, Maleeha Azam, Saqib Mahmood, Abolfazl Heidari, Raheel Qamar, Leon French, Shreejoy Tripathy, Zehra Agha, Muhammed Iqbal, Majid Ghadami, Susan Santangelo, Bita Bozorgmehr, Laila Al Ayadhi, Roksana Sasanfar, Shazia Maqbool, James A. Knowles, Muhammad Ayub, John B Vincent. Cold Spring Harbor Laboratory, Dec 2021-21:19
Thulasi Thiruvallur Madanagopal , Seng Han, Yee Kit Tai, Seng Han Lim, Charlene Hui Hua Fong, Tong Cao, Vinicius Rosa, Alfredo Franco-Obregón. Pulsed electromagnetic fields synergize with graphene to enhance dental pulp stem cell-derived neurogenesis by selectively targeting TRPC1 channels. European cells and materials, Mar 1;41:216-232, 2021.
E.K. Luong-Van, Thulasi Thiruvallur Madanagopal , Vinicius Rosa, Mechanism of graphene influence on cell differentiation. Materials Today Chemistry, 16:100250, 2020.
Thulasi Thiruvallur Madanagopal , Alfredo Franco-Obregón, Vinicius Rosa. Comparative study of xeno-free induction protocols for neural differentiation of human dental pulp stem cells in vitro. Archives of oral biology, 109, 2020.
Thulasi Thiruvallur Madanagopal , Shruti Vidhawan Agarwalla, Vinicius Rosa, “Carbon nanocomposites for implant dentistry and bone tissue engineering” in “Applications of Nanocomposite Materials in Dentistry”, Editor: Dr. Inamuddin, Elsevier, 2018.
Seng Han Lim, Yuanyuan Sun, Thulasi Thiruvallur Madanagopal , Vinicius Rosa, Lifeng Kang. Enhanced Skin Permeation of Anti-wrinkle Peptides via Molecular Modification, Scientific reports, 8: 1596, 2018.
Book chapter: Thulasi Thiruvallur Madanagopal , Shruti Vidhawan Agarwalla, Vinicius Rosa, “Carbon nanocomposites for implant dentistry and bone tissue engineering” in “Applications of Nanocomposite Materials in Dentistry”, Editor: Inamuddin Inamuddin, Elsevier, 2018.
B.H. Ali, A. Ramkumar, Thulasi Thiruvallur Madanagopal , S. Al-Abri, M.I. Wali, M. Tageldin, M. Fahim, A.Nemmar. Motor and behavioural changes in mice with cisplatin-induced acute renal failure. Physiological Research, 2014.
B.H. Ali, Thulasi Thiruvallur Madanagopal , A. Ramkumar, M. Tageldin, M.I. Waly A. Nemmar. Some physiological and histological aspects of the gastrointestinal tract in a mouse model of chronic renal failure. Journal of Pharmacological and Toxicological Methods, 2014.
Ibrahim Inuwa, Mohamed Al Za'abi, Aishwarya Ramkumar, Thulasi Thiruvallur Madanagopal , Abderrahim Nemmar, Badreldin H Ali. Renal and myocardial histopathology and morphometry in rats with adenine - induced chronic renal failure: influence of gum acacia. Cellular Physiology and Biochemistry: international journal of experimental cellular physiology, biochemistry and pharmacology, 2014.
Badreldin H Ali, M Al Za'abi, MI Waly, A Ramkumar, Thulasi Thiruvallur Madanagopal , I Lawati, A Nemmar. Effect of charcoal treatment on rats with adenine-induced chronic renal failure. The FASEB Journal, 2013.
B.H. Ali, A. Ramkumar, Thulasi Thiruvallur Madanagopal , M.I. Wali, A. Nemmar. Effect of charcoal treatment on adenine induced chronic renal failure in rats, presented at Experimental Biology 2013 meeting in Boston, 20-24th April 2013.
Ramkumar, Thulasi Thiruvallur Madanagopal , S. Al-Abri, A. Nemmar, B. H. Ali. Motor and behavioural changes in mice with cisplatin (CP) - induced acute renal failure (ARF), presented at EACPT 2013 congress in Geneva, 28th to 31st August 2013.
Conference presentations
ASHG, Short peptides targeting MECP2 Rett syndrome mutations through phage display, 11/01/23 - 11/05/23, Washington DC, USA
ASHG, Analysis of mRNA and protein expression levels of MECP2 in missense mutant iPSC and lymphoblast lines against isogenic controls, 10/25/22 - 10/29/22, Los Angeles, USA
SEA-IADR, Neural differentiation of dental pulp stem cells on advanced 2D materials, 08/10/17 - 08/13/17, Taipei, Taiwan
IADR, Comparative study of different neural induction conditions for neural differentiation of dental pulp stem cell in vitro, 06/22/16 - 06/25/16
Faculty of Biological Science, University of Leeds, Reconstruction of Barrett's Oesophagus and Oesophageal Adenocarcinoma in vitro and study the effects of demethylation, 09/07/10
The Techfest of Life Science, Detection of Johne's disease using polymerase chain reaction, 03/28/09
Bioblaze, Re-Engineered Human T Cells Effectively Target and Kill Cancer Cells, 09/19/08 - 09/20/08
National Conference on Biotechnology, Rhizome to a garden - Micropropagation way of conserving rare and endangered Himalayan medicinal plants, 03/28/08
Medico Venturus 08, Gold Nanoshells for the Diagnosis and Treatment of Cancer, 03/04/08 - 03/06/08
National Level Symposium on Biotechnology, 01/17/08 - 01/19/08
Students' Biotechnology Forum, Stem cells-a Blitzkrieg to Combat Diabetes, 08/25/07
Professional development courses
In person course in equity, diversion and inclusion (EDI) at CAMH in 06/2019.
Online course in writing effective teaching dossier conducted by University of Toronto in 07/2022.
Online course in writing resume and professional curriculum vitae conducted by University of Toronto in 07/2022.
Languages
English
Full Professional
Tamil
Full Professional
Timeline
Research Scientist
Wilfrid Laurier University
07.2024 - Current
Postdoctoral Research Fellow
Center for Addiction and Mental Health
05.2019 - 08.2023
Volunteer Research Attachment
National University of Singapore
12.2013 - 07.2014
Research Assistant
Sultan Qaboos University
10.2012 - 03.2013
Bachelor of Technology (B.Tech) - Biotechnology
Anna University
Ph.D. - Stem Cell Differentiation And Neuroscience
National University of Singapore
Masters - Bioscience (Human Genetics)
University of Leeds
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